============================= test session starts ==============================
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platform linux -- Python 3.5.2, pytest-3.2.0, py-1.4.34, pluggy-0.4.0
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rootdir: /astro/users/danielsf/lsstsw3/build/meas_algorithms, inifile:
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plugins: session2file-0.1.9, xdist-1.19.2.dev0+g459d52e.d20170831, forked-0.3.dev0+g1dd93f6.d20170831, flake8-0.8.1
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gw0 I / gw1 I / gw2 I / gw3 I / gw4 I / gw5 I / gw6 I / gw7 I / gw8 I / gw9 I / gw10 I / gw11 I / gw12 I / gw13 I / gw14 I / gw15 I / gw16 I / gw17 I / gw18 I / gw19 I / gw20 I / gw21 I / gw22 I / gw23 I / gw24 I / gw25 I / gw26 I / gw27 I / gw28 I / gw29 I / gw30 I / gw31 I
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gw0 [162] / gw1 [162] / gw2 [162] / gw3 [162] / gw4 [162] / gw5 [162] / gw6 [162] / gw7 [162] / gw8 [162] / gw9 [162] / gw10 [162] / gw11 [162] / gw12 [162] / gw13 [162] / gw14 [162] / gw15 [162] / gw16 [162] / gw17 [162] / gw18 [162] / gw19 [162] / gw20 [162] / gw21 [162] / gw22 [162] / gw23 [162] / gw24 [162] / gw25 [162] / gw26 [162] / gw27 [162] / gw28 [162] / gw29 [162] / gw30 [162] / gw31 [162]
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scheduling tests via LoadScheduling
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.....................................................................................................................F............................................
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generated xml file: /astro/users/danielsf/lsstsw3/build/meas_algorithms/tests/.tests/pytest-meas_algorithms.xml
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=================================== FAILURES ===================================
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__________________ SpatialModelPsfTestCase.testCandidateList ___________________
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[gw5] linux -- Python 3.5.2 /astro/users/danielsf/lsstsw3/miniconda/bin/python
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self = <test_psfIO.SpatialModelPsfTestCase testMethod=testCandidateList>
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def setUp(self):
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width, height = 100, 300
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self.mi = afwImage.MaskedImageF(afwGeom.ExtentI(width, height))
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self.mi.set(0)
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self.mi.getVariance().set(10)
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self.mi.getMask().addMaskPlane("DETECTED")
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self.FWHM = 5
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self.ksize = 25 # size of desired kernel
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self.exposure = afwImage.makeExposure(self.mi)
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psf = roundTripPsf(2, algorithms.DoubleGaussianPsf(self.ksize, self.ksize,
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self.FWHM/(2*math.sqrt(2*math.log(2))), 1, 0.1))
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self.exposure.setPsf(psf)
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for x, y in [(20, 20),
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# (30, 35), (50, 50),
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(60, 20), (60, 210), (20, 210)]:
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flux = 10000 - 0*x - 10*y
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sigma = 3 + 0.01*(y - self.mi.getHeight()/2)
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> psf = roundTripPsf(3, algorithms.DoubleGaussianPsf(self.ksize, self.ksize, sigma, 1, 0.1))
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tests/test_psfIO.py:111:
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_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
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key = 3
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psf = <lsst.meas.algorithms.doubleGaussianPsf.DoubleGaussianPsf object at 0x7fca627e56f8>
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def roundTripPsf(key, psf):
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global psfFileNum
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pol = policy.Policy()
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additionalData = dafBase.PropertySet()
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if psfFileNum % 2 == 1:
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storageType = "Boost"
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else:
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storageType = "Xml"
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loc = dafPersist.LogicalLocation(
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"tests/data/psf%d-%d.%s" % (psfFileNum, key, storageType))
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psfFileNum += 1
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persistence = dafPersist.Persistence.getPersistence(pol)
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storageList = dafPersist.StorageList()
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storage = persistence.getPersistStorage("%sStorage" % (storageType), loc)
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storageList.append(storage)
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persistence.persist(psf, storageList, additionalData)
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storageList2 = dafPersist.StorageList()
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> storage2 = persistence.getRetrieveStorage("%sStorage" % (storageType), loc)
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E RuntimeError: unrecognized XML syntax
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tests/test_psfIO.py:78: RuntimeError
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==================== 1 failed, 161 passed in 40.90 seconds =====================
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============================= test session starts ==============================
platform linux -- Python 3.5.2, pytest-3.2.0, py-1.4.34, pluggy-0.4.0
rootdir: /astro/users/danielsf/lsstsw3/build/meas_algorithms, inifile:
plugins: session2file-0.1.9, xdist-1.19.2.dev0+g459d52e.d20170831, forked-0.3.dev0+g1dd93f6.d20170831, flake8-0.8.1
gw0 I / gw1 I / gw2 I / gw3 I / gw4 I / gw5 I / gw6 I / gw7 I / gw8 I / gw9 I / gw10 I / gw11 I / gw12 I / gw13 I / gw14 I / gw15 I / gw16 I / gw17 I / gw18 I / gw19 I / gw20 I / gw21 I / gw22 I / gw23 I / gw24 I / gw25 I / gw26 I / gw27 I / gw28 I / gw29 I / gw30 I / gw31 I
gw0 [162] / gw1 [162] / gw2 [162] / gw3 [162] / gw4 [162] / gw5 [162] / gw6 [162] / gw7 [162] / gw8 [162] / gw9 [162] / gw10 [162] / gw11 [162] / gw12 [162] / gw13 [162] / gw14 [162] / gw15 [162] / gw16 [162] / gw17 [162] / gw18 [162] / gw19 [162] / gw20 [162] / gw21 [162] / gw22 [162] / gw23 [162] / gw24 [162] / gw25 [162] / gw26 [162] / gw27 [162] / gw28 [162] / gw29 [162] / gw30 [162] / gw31 [162]
scheduling tests via LoadScheduling
.....................................................................................................................F............................................
generated xml file: /astro/users/danielsf/lsstsw3/build/meas_algorithms/tests/.tests/pytest-meas_algorithms.xml
=================================== FAILURES ===================================
__________________ SpatialModelPsfTestCase.testCandidateList ___________________
[gw5] linux -- Python 3.5.2 /astro/users/danielsf/lsstsw3/miniconda/bin/python
self = <test_psfIO.SpatialModelPsfTestCase testMethod=testCandidateList>
def setUp(self):
width, height = 100, 300
self.mi = afwImage.MaskedImageF(afwGeom.ExtentI(width, height))
self.mi.set(0)
self.mi.getVariance().set(10)
self.mi.getMask().addMaskPlane("DETECTED")
self.FWHM = 5
self.ksize = 25 # size of desired kernel
self.exposure = afwImage.makeExposure(self.mi)
psf = roundTripPsf(2, algorithms.DoubleGaussianPsf(self.ksize, self.ksize,
self.FWHM/(2*math.sqrt(2*math.log(2))), 1, 0.1))
self.exposure.setPsf(psf)
for x, y in [(20, 20),
# (30, 35), (50, 50),
(60, 20), (60, 210), (20, 210)]:
flux = 10000 - 0*x - 10*y
sigma = 3 + 0.01*(y - self.mi.getHeight()/2)
> psf = roundTripPsf(3, algorithms.DoubleGaussianPsf(self.ksize, self.ksize, sigma, 1, 0.1))
tests/test_psfIO.py:111:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
key = 3
psf = <lsst.meas.algorithms.doubleGaussianPsf.DoubleGaussianPsf object at 0x7fca627e56f8>
def roundTripPsf(key, psf):
global psfFileNum
pol = policy.Policy()
additionalData = dafBase.PropertySet()
if psfFileNum % 2 == 1:
storageType = "Boost"
else:
storageType = "Xml"
loc = dafPersist.LogicalLocation(
"tests/data/psf%d-%d.%s" % (psfFileNum, key, storageType))
psfFileNum += 1
persistence = dafPersist.Persistence.getPersistence(pol)
storageList = dafPersist.StorageList()
storage = persistence.getPersistStorage("%sStorage" % (storageType), loc)
storageList.append(storage)
persistence.persist(psf, storageList, additionalData)
storageList2 = dafPersist.StorageList()
> storage2 = persistence.getRetrieveStorage("%sStorage" % (storageType), loc)
E RuntimeError: unrecognized XML syntax
tests/test_psfIO.py:78: RuntimeError
==================== 1 failed, 161 passed in 40.90 seconds =====================