Details
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Type:
Story
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Status: Done
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Resolution: Done
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Fix Version/s: None
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Component/s: None
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Labels:None
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Story Points:1
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Epic Link:
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Team:Data Facility
Description
Run matchedVisitMetrics.py and validateDrp.py with the HSC RC2 w_2018_10 outputs from DM-13647.
Follow Michael Wood-Vasey's example:
# Need to specify tract, otherwise one will get a meas_base failure.
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matchedVisitMetrics.py "${REPO}" --output "${OUTREPO}" --config useJointCal=True --id visit=${VISITIDS} tract=${TRACT} |
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# Capture the output
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validateDrp.py "${OUTREPO}"/matchedVisit_${FILTER}.json --noplot > ${OUTREPO}/metrics.log |
Use the ticket branch of DM-13742.
Attachments
Issue Links
Activity
Hsin-Fang Chiang
created issue -
Hsin-Fang Chiang
made changes -
| Field | Original Value | New Value |
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| Epic Link |
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Hsin-Fang Chiang
made changes -
Hsin-Fang Chiang
made changes -
| Status | To Do [ 10001 ] | In Progress [ 3 ] |
A final command to add once the JSON output files are generated would be reportPerformance.py. This produces a text file report_performance.rst summarizing the KPMs for each filter. E.g., if the outputs are in JSON files in directories such as w_2018_08_HSC-R/ and w_2018_08_HSC-I, then
reportPerformance.py w_2018_08_HSC-*/*.json
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will create a report_performance.rst file with the following table summary:
[wmwv@lsst-dev01 HSC_RC_analysis]$ cat report_performance.rst
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====== ====== ======= ======== ======================= ======== ========
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Metric Filter Unit Operator SRD Requirement: design Value Comments
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====== ====== ======= ======== ======================= ======== ========
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AM1 HSC-I marcsec <= 10.0 4.63
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AF1 HSC-I <= 10.0 4.4
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AD1 HSC-I marcsec <= 20.0 14.4
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AM2 HSC-I marcsec <= 10.0 4.12
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AF2 HSC-I <= 10.0 4.45
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AD2 HSC-I marcsec <= 20.0 14.5
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AM3 HSC-I marcsec <= 15.0 0
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AF3 HSC-I <= 10.0 0.83
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AD3 HSC-I marcsec <= 30.0 12.1
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PA1 HSC-I mmag <= 5.0 44
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PA2 HSC-I mmag <= 15.0 320
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PF1 HSC-I <= 10.0 68.9
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TE1 HSC-I <= 2e-05 3.57e-06
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TE2 HSC-I <= 5e-05 3.71e-07
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AM1 HSC-R marcsec <= 10.0 0
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AF1 HSC-R <= 10.0 3.25
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AD1 HSC-R marcsec <= 20.0 13.1
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AM2 HSC-R marcsec <= 10.0 0
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AF2 HSC-R <= 10.0 4.22
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AD2 HSC-R marcsec <= 20.0 14.5
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AM3 HSC-R marcsec <= 15.0 0
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AF3 HSC-R <= 10.0 0.337
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AD3 HSC-R marcsec <= 30.0 11
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PA1 HSC-R mmag <= 5.0 52.1
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PA2 HSC-R mmag <= 15.0 165
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PF1 HSC-R <= 10.0 72.3
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TE1 HSC-R <= 2e-05 4.78e-06
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TE2 HSC-R <= 5e-05 3.38e-07
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====== ====== ======= ======== ======================= ======== ========
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Michael Wood-Vasey
added a comment - A final command to add once the JSON output files are generated would be reportPerformance.py . This produces a text file report_performance.rst summarizing the KPMs for each filter. E.g., if the outputs are in JSON files in directories such as w_2018_08_HSC-R/ and w_2018_08_HSC-I , then
reportPerformance.py w_2018_08_HSC-*/*.json
will create a report_performance.rst file with the following table summary:
[wmwv@lsst-dev01 HSC_RC_analysis]$ cat report_performance.rst
====== ====== ======= ======== ======================= ======== ========
Metric Filter Unit Operator SRD Requirement: design Value Comments
====== ====== ======= ======== ======================= ======== ========
AM1 HSC-I marcsec <= 10.0 4.63
AF1 HSC-I <= 10.0 4.4
AD1 HSC-I marcsec <= 20.0 14.4
AM2 HSC-I marcsec <= 10.0 4.12
AF2 HSC-I <= 10.0 4.45
AD2 HSC-I marcsec <= 20.0 14.5
AM3 HSC-I marcsec <= 15.0 0
AF3 HSC-I <= 10.0 0.83
AD3 HSC-I marcsec <= 30.0 12.1
PA1 HSC-I mmag <= 5.0 44
PA2 HSC-I mmag <= 15.0 320
PF1 HSC-I <= 10.0 68.9
TE1 HSC-I <= 2e-05 3.57e-06
TE2 HSC-I <= 5e-05 3.71e-07
AM1 HSC-R marcsec <= 10.0 0
AF1 HSC-R <= 10.0 3.25
AD1 HSC-R marcsec <= 20.0 13.1
AM2 HSC-R marcsec <= 10.0 0
AF2 HSC-R <= 10.0 4.22
AD2 HSC-R marcsec <= 20.0 14.5
AM3 HSC-R marcsec <= 15.0 0
AF3 HSC-R <= 10.0 0.337
AD3 HSC-R marcsec <= 30.0 11
PA1 HSC-R mmag <= 5.0 52.1
PA2 HSC-R mmag <= 15.0 165
PF1 HSC-R <= 10.0 72.3
TE1 HSC-R <= 2e-05 4.78e-06
TE2 HSC-R <= 5e-05 3.38e-07
====== ====== ======= ======== ======================= ======== ========
From running reportPerformance.py with w_2018_10, I got the following
/software/lsstsw/stack3_20171023/python/miniconda3-4.3.21/lib/python3.6/site-packages/astropy/table/row.py:56: FutureWarning: elementwise == comparison failed and returning scalar instead; this will raise an error or perform elementwise comparison in the future.
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return self.as_void() == other
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/home/hchiang2/stack/validate_drp/python/lsst/validate/drp/report_performance.py:183: UserWarning: Warning: converting a masked element to nan.
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return format_string.format(float(f))
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Metric: TE1 not available in release_metrics file.
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Nonetheless the report_performance.rst file was generated:
====== ====== ======= ======== ======================= ======== ========
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Metric Filter Unit Operator SRD Requirement: design Value Comments
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====== ====== ======= ======== ======================= ======== ========
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AM1 HSC-G marcsec <= 10.0 7.84
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AF1 HSC-G <= 10.0 2.15
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AD1 HSC-G marcsec <= 20.0 8.58
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AM2 HSC-G marcsec <= 10.0 8.22
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AF2 HSC-G <= 10.0 2.03
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AD2 HSC-G marcsec <= 20.0 9.14
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AM3 HSC-G <= 15.0 --
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AF3 HSC-G <= 10.0 --
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AD3 HSC-G <= 30.0 --
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PA1 HSC-G mmag <= 5.0 17.7
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PA2 HSC-G mmag <= 15.0 35.1
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PF1 HSC-G <= 10.0 39.4
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TE1 HSC-G <= 2e-05 1.62e-06
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TE2 HSC-G <= 5e-05 1.51e-07
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AM1 HSC-I marcsec <= 10.0 7.9
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AF1 HSC-I <= 10.0 2.19
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AD1 HSC-I marcsec <= 20.0 8.01
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AM2 HSC-I marcsec <= 10.0 8.2
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AF2 HSC-I <= 10.0 3.7
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AD2 HSC-I marcsec <= 20.0 9.84
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AM3 HSC-I <= 15.0 --
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AF3 HSC-I <= 10.0 --
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AD3 HSC-I <= 30.0 --
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PA1 HSC-I mmag <= 5.0 18.4
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PA2 HSC-I mmag <= 15.0 38.2
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PF1 HSC-I <= 10.0 42.6
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TE1 HSC-I <= 2e-05 3.77e-06
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TE2 HSC-I <= 5e-05 8.59e-07
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AM1 HSC-R marcsec <= 10.0 9.7
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AF1 HSC-R <= 10.0 4.13
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AD1 HSC-R marcsec <= 20.0 11.1
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AM2 HSC-R marcsec <= 10.0 9.34
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AF2 HSC-R <= 10.0 6.12
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AD2 HSC-R marcsec <= 20.0 13.1
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AM3 HSC-R <= 15.0 --
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AF3 HSC-R <= 10.0 --
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AD3 HSC-R <= 30.0 --
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PA1 HSC-R mmag <= 5.0 21.7
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PA2 HSC-R mmag <= 15.0 42.2
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PF1 HSC-R <= 10.0 48.3
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TE1 HSC-R <= 2e-05 5.53e-06
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TE2 HSC-R <= 5e-05 9.41e-08
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AM1 HSC-Y marcsec <= 10.0 3.7
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AF1 HSC-Y <= 10.0 3.71
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AD1 HSC-Y marcsec <= 20.0 12
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AM2 HSC-Y marcsec <= 10.0 6.64
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AF2 HSC-Y <= 10.0 2.79
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AD2 HSC-Y marcsec <= 20.0 11.1
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AM3 HSC-Y <= 15.0 --
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AF3 HSC-Y <= 10.0 --
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AD3 HSC-Y <= 30.0 --
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PA1 HSC-Y mmag <= 7.5 19.1
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PA2 HSC-Y mmag <= 22.5 39
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PF1 HSC-Y <= 10.0 28.7
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TE1 HSC-Y <= 2e-05 8.61e-06
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TE2 HSC-Y <= 5e-05 1.93e-07
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AM1 HSC-Z marcsec <= 10.0 6.55
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AF1 HSC-Z <= 10.0 1.61
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AD1 HSC-Z marcsec <= 20.0 8.93
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AM2 HSC-Z marcsec <= 10.0 7.63
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AF2 HSC-Z <= 10.0 1.55
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AD2 HSC-Z marcsec <= 20.0 7.47
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AM3 HSC-Z <= 15.0 --
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AF3 HSC-Z <= 10.0 --
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AD3 HSC-Z <= 30.0 --
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PA1 HSC-Z mmag <= 7.5 17.9
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PA2 HSC-Z mmag <= 22.5 34.9
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PF1 HSC-Z <= 10.0 24
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TE1 HSC-Z <= 2e-05 5.55e-06
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TE2 HSC-Z <= 5e-05 1.65e-07
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====== ====== ======= ======== ======================= ======== ========
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Hsin-Fang Chiang
added a comment - From running reportPerformance.py with w_2018_10 , I got the following
/software/lsstsw/stack3_20171023/python/miniconda3-4.3.21/lib/python3.6/site-packages/astropy/table/row.py:56: FutureWarning: elementwise == comparison failed and returning scalar instead; this will raise an error or perform elementwise comparison in the future.
return self.as_void() == other
/home/hchiang2/stack/validate_drp/python/lsst/validate/drp/report_performance.py:183: UserWarning: Warning: converting a masked element to nan.
return format_string.format(float(f))
Metric: TE1 not available in release_metrics file.
Nonetheless the report_performance.rst file was generated:
====== ====== ======= ======== ======================= ======== ========
Metric Filter Unit Operator SRD Requirement: design Value Comments
====== ====== ======= ======== ======================= ======== ========
AM1 HSC-G marcsec <= 10.0 7.84
AF1 HSC-G <= 10.0 2.15
AD1 HSC-G marcsec <= 20.0 8.58
AM2 HSC-G marcsec <= 10.0 8.22
AF2 HSC-G <= 10.0 2.03
AD2 HSC-G marcsec <= 20.0 9.14
AM3 HSC-G <= 15.0 --
AF3 HSC-G <= 10.0 --
AD3 HSC-G <= 30.0 --
PA1 HSC-G mmag <= 5.0 17.7
PA2 HSC-G mmag <= 15.0 35.1
PF1 HSC-G <= 10.0 39.4
TE1 HSC-G <= 2e-05 1.62e-06
TE2 HSC-G <= 5e-05 1.51e-07
AM1 HSC-I marcsec <= 10.0 7.9
AF1 HSC-I <= 10.0 2.19
AD1 HSC-I marcsec <= 20.0 8.01
AM2 HSC-I marcsec <= 10.0 8.2
AF2 HSC-I <= 10.0 3.7
AD2 HSC-I marcsec <= 20.0 9.84
AM3 HSC-I <= 15.0 --
AF3 HSC-I <= 10.0 --
AD3 HSC-I <= 30.0 --
PA1 HSC-I mmag <= 5.0 18.4
PA2 HSC-I mmag <= 15.0 38.2
PF1 HSC-I <= 10.0 42.6
TE1 HSC-I <= 2e-05 3.77e-06
TE2 HSC-I <= 5e-05 8.59e-07
AM1 HSC-R marcsec <= 10.0 9.7
AF1 HSC-R <= 10.0 4.13
AD1 HSC-R marcsec <= 20.0 11.1
AM2 HSC-R marcsec <= 10.0 9.34
AF2 HSC-R <= 10.0 6.12
AD2 HSC-R marcsec <= 20.0 13.1
AM3 HSC-R <= 15.0 --
AF3 HSC-R <= 10.0 --
AD3 HSC-R <= 30.0 --
PA1 HSC-R mmag <= 5.0 21.7
PA2 HSC-R mmag <= 15.0 42.2
PF1 HSC-R <= 10.0 48.3
TE1 HSC-R <= 2e-05 5.53e-06
TE2 HSC-R <= 5e-05 9.41e-08
AM1 HSC-Y marcsec <= 10.0 3.7
AF1 HSC-Y <= 10.0 3.71
AD1 HSC-Y marcsec <= 20.0 12
AM2 HSC-Y marcsec <= 10.0 6.64
AF2 HSC-Y <= 10.0 2.79
AD2 HSC-Y marcsec <= 20.0 11.1
AM3 HSC-Y <= 15.0 --
AF3 HSC-Y <= 10.0 --
AD3 HSC-Y <= 30.0 --
PA1 HSC-Y mmag <= 7.5 19.1
PA2 HSC-Y mmag <= 22.5 39
PF1 HSC-Y <= 10.0 28.7
TE1 HSC-Y <= 2e-05 8.61e-06
TE2 HSC-Y <= 5e-05 1.93e-07
AM1 HSC-Z marcsec <= 10.0 6.55
AF1 HSC-Z <= 10.0 1.61
AD1 HSC-Z marcsec <= 20.0 8.93
AM2 HSC-Z marcsec <= 10.0 7.63
AF2 HSC-Z <= 10.0 1.55
AD2 HSC-Z marcsec <= 20.0 7.47
AM3 HSC-Z <= 15.0 --
AF3 HSC-Z <= 10.0 --
AD3 HSC-Z <= 30.0 --
PA1 HSC-Z mmag <= 7.5 17.9
PA2 HSC-Z mmag <= 22.5 34.9
PF1 HSC-Z <= 10.0 24
TE1 HSC-Z <= 2e-05 5.55e-06
TE2 HSC-Z <= 5e-05 1.65e-07
====== ====== ======= ======== ======================= ======== ========
The results and logs of running the 3 tasks with w_2018_10 are at:
/project/hsc_rc/w_2018_10/DM-13647/validate_drp_outputs/
Michael Wood-Vasey please take a look.
Hsin-Fang Chiang
added a comment - The results and logs of running the 3 tasks with w_2018_10 are at:
/project/hsc_rc/w_2018_10/ DM-13647 /validate_drp_outputs/
Michael Wood-Vasey please take a look. Hsin-Fang Chiang
made changes -
| Resolution | Done [ 10000 ] | |
| Status | In Progress [ 3 ] | Done [ 10002 ] |
p.s. The reportPerformance.py above was run with the json files from all 3 tracts. Would we want to separate them per tract?
Hsin-Fang Chiang
added a comment - p.s. The reportPerformance.py above was run with the json files from all 3 tracts. Would we want to separate them per tract? Sorry, I should have given a heads up that I expected the TE1 not available in release_metrics file. message. It still generates a summary result, so there's some bug somewhere that I should chase down at some point.
Michael Wood-Vasey
added a comment - Sorry, I should have given a heads up that I expected the TE1 not available in release_metrics file. message. It still generates a summary result, so there's some bug somewhere that I should chase down at some point. Yes, separate by tract for now.
Michael Wood-Vasey
added a comment - Yes, separate by tract for now. > The results and logs of running the 3 tasks with w_2018_10 are at:
> /project/hsc_rc/w_2018_10/DM-13647/validate_drp_outputs/
>
> Michael Wood-Vasey please take a look.
These plots and output logs look good.
Michael Wood-Vasey
added a comment -
> The results and logs of running the 3 tasks with w_2018_10 are at:
> /project/hsc_rc/w_2018_10/ DM-13647 /validate_drp_outputs/
>
> Michael Wood-Vasey please take a look.
These plots and output logs look good. The per-tract results are in the same folder now:
/project/hsc_rc/w_2018_10/DM-13647/validate_drp_outputs/9615/report_performance-9615.rst
/project/hsc_rc/w_2018_10/DM-13647/validate_drp_outputs/9697/report_performance-9697.rst
/project/hsc_rc/w_2018_10/DM-13647/validate_drp_outputs/9813/report_performance-9813.rst
Hsin-Fang Chiang
added a comment - The per-tract results are in the same folder now:
/project/hsc_rc/w_2018_10/ DM-13647 /validate_drp_outputs/9615/report_performance-9615.rst
/project/hsc_rc/w_2018_10/ DM-13647 /validate_drp_outputs/9697/report_performance-9697.rst
/project/hsc_rc/w_2018_10/ DM-13647 /validate_drp_outputs/9813/report_performance-9813.rst 
Michael Wood-Vasey
added a comment - Michael Wood-Vasey
made changes -
The HSC RC2 dataset includes data in filter=NB0921 in the COSMOS tract; it will be ignored here because filter metric definitions need to be added.
File "/software/lsstsw/stack3_20171023/stack/miniconda3-4.3.21-10a4fa6/Linux64/pipe_base/14.0-6-ge2c9487+51/python/lsst/pipe/base/cmdLineTask.py", line 586, in parseAndRunresultList = taskRunner.run(parsedCmd)File "/software/lsstsw/stack3_20171023/stack/miniconda3-4.3.21-10a4fa6/Linux64/pipe_base/14.0-6-ge2c9487+51/python/lsst/pipe/base/cmdLineTask.py", line 240, in runresultList = list(mapFunc(self, targetList))File "/home/hchiang2/stack/validate_drp/python/lsst/validate/drp/matchedVisitMetricsTask.py", line 36, in __call__return task.run(*args)File "/home/hchiang2/stack/validate_drp/python/lsst/validate/drp/matchedVisitMetricsTask.py", line 133, in runverbose=self.config.verbose)File "/home/hchiang2/stack/validate_drp/python/lsst/validate/drp/validate.py", line 311, in runOneFilterjob=job, linkedBlobs=linkedBlobs)File "/home/hchiang2/stack/validate_drp/python/lsst/validate/drp/calcsrd/pf1.py", line 72, in __init__PA2.get_spec(spec_name, filter_name=self.filter_name)File "/software/lsstsw/stack3_20171023/stack/miniconda3-4.3.21-10a4fa6/Linux64/validate_base/master-g24db930f3a+22/python/lsst/validate/base/metric.py", line 381, in get_specname, filter_name, self.name))RuntimeError: No PA2 spec found for name=stretch filter_name=NB0921