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  1. Data Management
  2. DM-15593

daf_persistence segfaults on Princeton tiger2 cluster

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    • Status: Done
    • Resolution: Done
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    Description

      Building daf_persistence on tiger2-sumire fails as follows:

      $ exec scl enable devtoolset-6 bash                                                                                                          
      $ bash newinstall.sh
       
        [elided]
       
      $ . loadLSST.bash 
      $ eups distrib install -t w_2018_34 daf_persistence
       
         [elided]
       
        [ 34/34 ]  daf_persistence 16.0-3-g3806c63+6 ... 
       
      ***** error: from /scratch/swinbank/stack_master/stack/miniconda3-4.5.4-fcd27eb/EupsBuildDir/Linux64/daf_persistence-16.0-3-g3806c63+6/build.log:
      Coverage.py warning: No data was collected. (no-data-collected)
      Global pytest run completed successfully
      Failed test output:
      tests/Persistence_3
       
      Running 1 test case...
       
      *** No errors detected
      tests/PropertySet_2
       
      Running 1 test case...
       
      *** No errors detected
      The following tests failed:
      /scratch/swinbank/stack_master/stack/miniconda3-4.5.4-fcd27eb/EupsBuildDir/Linux64/daf_persistence-16.0-3-g3806c63+6/daf_persistence-16.0-3-g3806c63+6/tests/.tests/Persistence_3.
      failed
      /scratch/swinbank/stack_master/stack/miniconda3-4.5.4-fcd27eb/EupsBuildDir/Linux64/daf_persistence-16.0-3-g3806c63+6/daf_persistence-16.0-3-g3806c63+6/tests/.tests/PropertySet_2.
      failed
      2 tests failed
      scons: *** [checkTestStatus] Error 1
      scons: building terminated because of errors.
      + exit -4
      eups distrib: Failed to build daf_persistence-16.0-3-g3806c63+6.eupspkg: Command:
              source "/scratch/swinbank/stack_master/eups/2.1.4/bin/setups.sh"; export EUPS_PATH="/scratch/swinbank/stack_master/stack/miniconda3-4.5.4-fcd27eb"; (/scratch/swinbank/sta
      ck_master/stack/miniconda3-4.5.4-fcd27eb/EupsBuildDir/Linux64/daf_persistence-16.0-3-g3806c63+6/build.sh) >> /scratch/swinbank/stack_master/stack/miniconda3-4.5.4-fcd27eb/EupsBui
      ldDir/Linux64/daf_persistence-16.0-3-g3806c63+6/build.log 2>&1 4>/scratch/swinbank/stack_master/stack/miniconda3-4.5.4-fcd27eb/EupsBuildDir/Linux64/daf_persistence-16.0-3-g3806c6
      3+6/build.msg 
      exited with code 252
      

      This means that the shared stack on Tiger is not currently being updated.

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              swinbank John Swinbank
              swinbank John Swinbank
              Jim Bosch, John Swinbank, Tim Jenness
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