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  1. Data Management
  2. DM-22389

verify fails with Astropy 4

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    Details

    • Type: Bug
    • Status: Done
    • Resolution: Done
    • Fix Version/s: None
    • Component/s: verify
    • Labels:
      None
    • Story Points:
      2
    • Epic Link:
    • Sprint:
      AP F19-6 (November)
    • Team:
      Alert Production

      Description

      Doing a build with Astropy4 I now get failures from verify package relating to YAML serialization.

      This works fine with the same version of YAML on Astropy 3 but fails on Astropy 4.

      self = <yaml.loader.SafeLoader object at 0x7fbb0063aba8>
      		 
      node = SequenceNode(tag='tag:yaml.org,2002:python/object/apply:numpy.core.multiarray.scalar', value=[MappingNode(tag='tag:yam...Node(tag='tag:yaml.org,2002:int', value='0')]))]), ScalarNode(tag='tag:yaml.org,2002:binary', value='AAAAAAAAFEA=\n')])
      		 
       
      		 
          def construct_undefined(self, node):
      		 
              raise ConstructorError(None, None,
      		 
                      "could not determine a constructor for the tag %r" % node.tag,
      		 
      >               node.start_mark)
      		 
      E       yaml.constructor.ConstructorError: could not determine a constructor for the tag 'tag:yaml.org,2002:python/object/apply:numpy.core.multiarray.scalar'
      		 
      E         in "<unicode string>", line 9, column 14:
      		 
      E                 value: !!python/object/apply:numpy.core ... 
      E                        ^
      		 
       
      		 
      ../../stack/DarwinX86/pyyaml/5.1+2/lib/python/yaml/constructor.py:420: ConstructorError

        Attachments

          Issue Links

          is triggered by

          Story - Created by Jira Software - do not edit or delete. Issue type for a user story. DM-22388 Investigate Astropy 4

          • Done
          relates to

          Story - Created by Jira Software - do not edit or delete. Issue type for a user story. DM-21875 Add StorageClass and Formatter support necessary to persist lsst.verify.Measurement in Gen3 repos

          • Done
          links to

          Web Link GitHub issue

            Activity

            Ascending order - Click to sort in descending order
            tjenness Tim Jenness created issue -
            tjenness Tim Jenness made changes -
            Field Original Value New Value
            Link This issue is triggered by DM-22388 [ DM-22388 ]
            tjenness Tim Jenness made changes -
            Link This issue relates to DM-21875 [ DM-21875 ]
            krzys Krzysztof Findeisen made changes -
            Epic Link DM-21441 [ 423048 ]
            krzys Krzysztof Findeisen made changes -
            Sprint AP F19-6 (November) [ 958 ]
            Story Points 2
            krzys Krzysztof Findeisen made changes -
            Status To Do [ 10001 ] In Progress [ 3 ]
            krzys Krzysztof Findeisen made changes -
            Comment [ This code looks suspicious: https://github.com/lsst/verify/blob/master/python/lsst/verify/datum.py#L109-L111. I can't figure out where it's called, though. ]
            tjenness Tim Jenness made changes -
            Remote Link This issue links to "GitHub issue (Web Link)" [ 22582 ]
            krzys Krzysztof Findeisen made changes -
            Reviewers Tim Jenness [ tjenness ]
            Status In Progress [ 3 ] In Review [ 10004 ]
            krzys Krzysztof Findeisen made changes -
            Issue Type Story [ 10001 ] Bug [ 1 ]
            krzys Krzysztof Findeisen made changes -
            Status In Review [ 10004 ] Reviewed [ 10101 ]
            krzys Krzysztof Findeisen made changes -
            Resolution Done [ 10000 ]
            Status Reviewed [ 10101 ] Done [ 10002 ]

              People

              • Assignee:
                krzys Krzysztof Findeisen
                Reporter:
                tjenness Tim Jenness
                Reviewers:
                Tim Jenness
                Watchers:
                John Swinbank, Krzysztof Findeisen, Tim Jenness
              • Votes:
                0 Vote for this issue
                Watchers:
                3 Start watching this issue

                Dates

                • Created:
                  Updated:
                  Resolved:

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