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  1. Data Management
  2. DM-23349

Build new shared stack with updated conda env

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      Description

      Once the conda env is updated in DM-22817, a new shared stack needs to be created.

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          is blocked by

          Story - Created by Jira Software - do not edit or delete. Issue type for a user story. DM-22817 Update conda base environment

          • Done
          is triggered by

          RFC - An issue whose primary purpose is to advertise an intent and allow stakeholders to comment. RFC-664 Update conda base environment

          • Implemented
          relates to

          Story - Created by Jira Software - do not edit or delete. Issue type for a user story. DM-22030 Add panel + dependencies to shared stack

          • Done

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            tjenness Tim Jenness created issue -
            tjenness Tim Jenness made changes -
            Field Original Value New Value
            Link This issue is triggered by RFC-664 [ RFC-664 ]
            tjenness Tim Jenness made changes -
            Link This issue is blocked by DM-22817 [ DM-22817 ]
            tjenness Tim Jenness made changes -
            Assignee John Swinbank [ swinbank ]
            swinbank John Swinbank made changes -
            Link This issue relates to DM-22030 [ DM-22030 ]
            swinbank John Swinbank made changes -
            Status To Do [ 10001 ] In Progress [ 3 ]
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            swinbank John Swinbank added a comment -

            In an attempt to satisfy DM-22030 at the same time as this ticket, after bootstrapping the Conda environment but before installing any stack code, I am doing:

            $ conda install --no-update-deps panel==0.8.0 holoviews==1.12.7 hvplot=0.5.2 bokeh==1.4.0 pyviz_comms==0.7.3 fastparquet==0.3.2 numba==0.46.0 datashader==0.8.0 pyct==0.4.6 dask-jobqueue==0.7.0 snappy
            		 
            $ conda install -c conda-forge --no-update-deps geoviews

            (I can't find a way to satisfy the request for geopandas.)

            Then to satisfy requests from CLO:

            $ conda install --no-update-deps cx_Oracle 
            $ conda install -c conda-forge --no-update-deps ipdb

            (Pyarrow and Dask are already pulled in, so no need to add them separately).

            Show
            swinbank John Swinbank added a comment - In an attempt to satisfy DM-22030 at the same time as this ticket, after bootstrapping the Conda environment but before installing any stack code, I am doing: $ conda install --no-update-deps panel==0.8.0 holoviews==1.12.7 hvplot=0.5.2 bokeh==1.4.0 pyviz_comms==0.7.3 fastparquet==0.3.2 numba==0.46.0 datashader==0.8.0 pyct==0.4.6 dask-jobqueue==0.7.0 snappy $ conda install -c conda-forge --no-update-deps geoviews (I can't find a way to satisfy the request for geopandas.) Then to satisfy requests from CLO : $ conda install --no-update-deps cx_Oracle $ conda install -c conda-forge --no-update-deps ipdb (Pyarrow and Dask are already pulled in, so no need to add them separately).
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            swinbank John Swinbank added a comment -

            New shared stack now in place at /software/lsstsw/stack_20200220. Doc updates and making this the default to come.

            Show
            swinbank John Swinbank added a comment - New shared stack now in place at /software/lsstsw/stack_20200220 . Doc updates and making this the default to come.
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            swinbank John Swinbank added a comment -

            ...but does not include sims, due to SIM-2621.

            Show
            swinbank John Swinbank added a comment - ...but does not include sims, due to SIM-2621.
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            swinbank John Swinbank added a comment -

            Docs updated: https://github.com/lsst-dm/dm_dev_guide/commit/32294e368ee10835372883a2dfda73f02672086c
            CLO post: https://community.lsst.org/t/lsst-dev-shared-stack-updated-for-rfc-664/4049

            My work here is done.

            Show
            swinbank John Swinbank added a comment - Docs updated: https://github.com/lsst-dm/dm_dev_guide/commit/32294e368ee10835372883a2dfda73f02672086c CLO post: https://community.lsst.org/t/lsst-dev-shared-stack-updated-for-rfc-664/4049 My work here is done.
            swinbank John Swinbank made changes -
            Resolution Done [ 10000 ]
            Status In Progress [ 3 ] Done [ 10002 ]
            swinbank John Swinbank made changes -
            Epic Link DM-22484 [ 427311 ]
            swinbank John Swinbank made changes -
            Story Points 1

              People

              Assignee:
              swinbank John Swinbank
              Reporter:
              tjenness Tim Jenness
              Watchers:
              John Swinbank, Tim Jenness
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              2 Start watching this issue

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                Updated:
                Resolved:

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