[DM-35876] Install Packages for the Unit Tests with PySide2 - Jira

Te-Wei Tsai created issue - 10/Aug/22 6:19 PM

Te-Wei Tsai made changes - 10/Aug/22 6:19 PM

Field	Original Value	New Value
Link		This issue is triggered by ~~DM-35779~~ [ ~~DM-35779~~ ]

Te-Wei Tsai made changes - 10/Aug/22 6:19 PM

Link

This issue is triggered by ~~DM-35756~~ [ ~~DM-35756~~ ]

Te-Wei Tsai made changes - 10/Aug/22 6:19 PM

Labels

M2

Te-Wei Tsai made changes - 10/Aug/22 7:02 PM

Description

Please help to install the packages (*xorg-x11-server-Xvfb* and *pytest-xvfb*) in the docker image of *lsstts/develop-env:develop*. By doing this, the unit tests with PySide2 can be executed without prompting the windows, which is important when using the Jenkins to do the CI job.

Please help to install the packages (*xorg-x11-server-Xvfb* and *pytest-xvfb*) in the docker image of *lsstts/develop-env:develop*. By doing this, the unit tests with PySide2 can be executed without prompting the windows, which is important when using the Jenkins to do the CI job. The former can use the *dnf* to install and the latter can be by *conda -c conda-forge*.

Te-Wei Tsai made changes - 10/Aug/22 7:03 PM

Description

Please help to install the packages (*xorg-x11-server-Xvfb* and *pytest-xvfb*) in the docker image of *lsstts/develop-env:develop*. By doing this, the unit tests with PySide2 can be executed without prompting the windows, which is important when using the Jenkins to do the CI job. The former can use the *dnf* to install and the latter can be by *conda -c conda-forge*.

Please help to install the packages (*xorg-x11-server-Xvfb* and *pytest-xvfb*) in the docker image of *lsstts/develop-env:develop*. By doing this, the unit tests with PySide2 can be executed without prompting the windows, which is important when using the Jenkins to do the CI job. The former can use the *dnf* to install and the latter can be installed by *conda -c conda-forge*.

Te-Wei Tsai made changes - 10/Aug/22 7:05 PM

Description

Please help to install the packages (*xorg-x11-server-Xvfb* and *pytest-xvfb*) in the docker image of *lsstts/develop-env:develop*. By doing this, the unit tests with PySide2 can be executed without prompting the windows, which is important when using the Jenkins to do the CI job. The former can use the *dnf* to install and the latter can be installed by *conda -c conda-forge*.

Please help to install the packages (*xorg-x11-server-Xvfb* and *pytest-xvfb*) in the docker image of *lsstts/develop-env:develop*. By doing this, the unit tests with PySide2 can be executed without prompting the windows, which is important when using the Jenkins to do the CI job. The former can use the *dnf* to install and the latter can be installed by *conda -c conda-forge*.

The installation can be tested by [ts_m2gui|https://github.com/lsst-ts/ts_m2gui/]. Assume the host machine is using the CentOS, you can do the following to enter the container:

{code:bash}
xhost local:root
docker run -it --rm -v ${path_to_ts_m2gui}:${path_of_package_in_container} ${docker_image}:${image_tag}
{code}

Te-Wei Tsai made changes - 10/Aug/22 7:08 PM

Description

Please help to install the packages (*xorg-x11-server-Xvfb* and *pytest-xvfb*) in the docker image of *lsstts/develop-env:develop*. By doing this, the unit tests with PySide2 can be executed without prompting the windows, which is important when using the Jenkins to do the CI job. The former can use the *dnf* to install and the latter can be installed by *conda -c conda-forge*.

The installation can be tested by [ts_m2gui|https://github.com/lsst-ts/ts_m2gui/]. Assume the host machine is using the CentOS, you can do the following to enter the container:

{code:bash}
xhost local:root
docker run -it --rm -v ${path_to_ts_m2gui}:${path_of_package_in_container} ${docker_image}:${image_tag}
{code}

Please help to install the packages (*xorg-x11-server-Xvfb* and *pytest-xvfb*) in the docker image of *lsstts/develop-env:develop*. By doing this, the unit tests with PySide2 can be executed without prompting the windows, which is important when using the Jenkins to do the CI job. The former can use the *dnf* to install and the latter can be installed by *conda -c conda-forge*.

The installation can be tested by [ts_m2gui|https://github.com/lsst-ts/ts_m2gui/]. Assume the host machine is using the CentOS, you can do the following to enter the container:

{code:bash}
docker run -it --rm -v ${path_to_ts_m2gui}:${path_of_package_in_container} ${docker_image}:${image_tag}
{code}

Note that you should not use the image forward to enter the container, which simulates the condition to run the CI on Jenkins instance. To setup this package (*ts_m2gui*), you can do *setup -kr ${path_of_package}* if the *eups* is used. Or you can export the *PYTHONPATH* directly for *ts_m2gui/python*.

After this, if you do *pytest tests/* under *ts_m2gui* directory, you should see all tests passed without prompting any window as the following:

Te-Wei Tsai made changes - 10/Aug/22 7:09 PM

Description

Please help to install the packages (*xorg-x11-server-Xvfb* and *pytest-xvfb*) in the docker image of *lsstts/develop-env:develop*. By doing this, the unit tests with PySide2 can be executed without prompting the windows, which is important when using the Jenkins to do the CI job. The former can use the *dnf* to install and the latter can be installed by *conda -c conda-forge*.

The installation can be tested by [ts_m2gui|https://github.com/lsst-ts/ts_m2gui/]. Assume the host machine is using the CentOS, you can do the following to enter the container:

{code:bash}
docker run -it --rm -v ${path_to_ts_m2gui}:${path_of_package_in_container} ${docker_image}:${image_tag}
{code}

Note that you should not use the image forward to enter the container, which simulates the condition to run the CI on Jenkins instance. To setup this package (*ts_m2gui*), you can do *setup -kr ${path_of_package}* if the *eups* is used. Or you can export the *PYTHONPATH* directly for *ts_m2gui/python*.

After this, if you do *pytest tests/* under *ts_m2gui* directory, you should see all tests passed without prompting any window as the following:

Please help to install the packages (*xorg-x11-server-Xvfb* and *pytest-xvfb*) in the docker image of *lsstts/develop-env:develop*. By doing this, the unit tests with PySide2 can be executed without prompting the windows, which is important when using the Jenkins to do the CI job. The former can use the *dnf* to install and the latter can be installed by *conda -c conda-forge*.

The installation can be tested by [ts_m2gui|https://github.com/lsst-ts/ts_m2gui/]. Assume the host machine is using the CentOS, you can do the following to enter the container:

{code:bash}
docker run -it --rm -v ${path_to_ts_m2gui}:${path_of_package_in_container} ${docker_image}:${image_tag}
{code}

Note that you should not use the image forward to enter the container, which simulates the condition to run the CI on Jenkins instance. To setup this package (*ts_m2gui*), you can do *setup -kr ${path_of_package}* if the *eups* is used. Or you can export the *PYTHONPATH* directly for *ts_m2gui/python*.

After this, if you do *pytest tests/* under *ts_m2gui* directory, you should see all tests passed without prompting any window as the following:

{code:text}
[saluser@ba2452d2ef09 ts_m2gui]$ pytest tests/
============================= test session starts ==============================
platform linux -- Python 3.10.5, pytest-7.1.2, pluggy-1.0.0
PySide2 5.13.2 -- Qt runtime 5.12.9 -- Qt compiled 5.12.9
rootdir: /home/saluser/ts_m2gui, configfile: setup.cfg
plugins: cov-3.0.0, remotedata-0.3.3, astropy-header-0.1.2, openfiles-0.5.0, forked-1.4.0, session2file-0.1.11, hypothesis-6.47.1, mock-3.8.2, subtests-0.8.0, doctestplus-0.12.0, arraydiff-0.3, xdist-2.5.0, asdf-2.10.1, astropy-0.10.0, flake8-1.1.1, filter-subpackage-0.1.1, xvfb-2.0.0, qt-4.1.0, anyio-3.6.1, asyncio-0.18.3, black-0.3.12, tornasync-0.6.0.post2, mypy-0.8.0
asyncio: mode=legacy
collected 172 items

tests/test_control_tabs.py s..... [ 3%]
tests/test_fault_manager.py ............. [ 11%]
tests/test_main_window.py s.. [ 12%]
tests/test_model.py ....................... [ 26%]
tests/test_utility_monitor.py .................... [ 37%]
tests/test_utils.py ...... [ 41%]
tests/controltab/test_tab_actuator_control.py s........... [ 48%]
tests/controltab/test_tab_alarm_warn.py s....... [ 52%]
tests/controltab/test_tab_cell_status.py s.... [ 55%]
tests/controltab/test_tab_config_view.py s. [ 56%]
tests/controltab/test_tab_default.py s.. [ 58%]
tests/controltab/test_tab_detailed_force.py s.. [ 60%]
tests/controltab/test_tab_diagnostics.py s........ [ 65%]
tests/controltab/test_tab_overview.py s...... [ 69%]
tests/controltab/test_tab_rigid_body_pos.py s.... [ 72%]
tests/controltab/test_tab_settings.py s.. [ 74%]
tests/controltab/test_tab_utility_view.py s....... [ 79%]
tests/display/test_figure_constant_realtime.py s... [ 81%]
tests/display/test_figure_constant_static.py s......... [ 87%]
tests/display/test_gauge.py s.... [ 90%]
tests/display/test_view_mirror.py s.... [ 93%]
tests/layout/test_layout_control.py s... [ 95%]
tests/layout/test_layout_control_mode.py s... [ 97%]
tests/layout/test_layout_local_mode.py s... [100%]

=============================== warnings summary ===============================
../../../opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/pytest_asyncio/plugin.py:191
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/pytest_asyncio/plugin.py:191: DeprecationWarning: The 'asyncio_mode' default value will change to 'strict' in future, please explicitly use 'asyncio_mode=strict' or 'asyncio_mode=auto' in pytest configuration file.
    config.issue_config_time_warning(LEGACY_MODE, stacklevel=2)

tests/test_fault_manager.py::flake-8::FLAKE8
tests/test_fault_manager.py::flake-8::FLAKE8
tests/test_model.py::flake-8::FLAKE8
tests/test_model.py::flake-8::FLAKE8
tests/test_utility_monitor.py::flake-8::FLAKE8
tests/test_utility_monitor.py::flake-8::FLAKE8
tests/test_utils.py::flake-8::FLAKE8
tests/test_utils.py::flake-8::FLAKE8
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/flake8/plugins/manager.py:261: DeprecationWarning: SelectableGroups dict interface is deprecated. Use select.
    eps = importlib_metadata.entry_points().get(self.namespace, ())

../../../opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/cacheprovider.py:433
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/cacheprovider.py:433: PytestCacheWarning: cache could not write path /home/saluser/ts_m2gui/.pytest_cache/v/cache/nodeids
    config.cache.set("cache/nodeids", sorted(self.cached_nodeids))

../../../opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/stepwise.py:52
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/stepwise.py:52: PytestCacheWarning: cache could not write path /home/saluser/ts_m2gui/.pytest_cache/v/cache/stepwise
    session.config.cache.set(STEPWISE_CACHE_DIR, [])

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
================ 152 passed, 20 skipped, 11 warnings in 15.90s =================
/opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/pytest_flake8.py:84: PytestCacheWarning: cache could not write path /home/saluser/ts_m2gui/.pytest_cache/v/flake8/mtimes
  config.cache.set(HISTKEY, config._flake8mtimes)
{code}

Te-Wei Tsai made changes - 10/Aug/22 7:12 PM

Description

Please help to install the packages (*xorg-x11-server-Xvfb* and *pytest-xvfb*) in the docker image of *lsstts/develop-env:develop*. By doing this, the unit tests with PySide2 can be executed without prompting the windows, which is important when using the Jenkins to do the CI job. The former can use the *dnf* to install and the latter can be installed by *conda -c conda-forge*.

The installation can be tested by [ts_m2gui|https://github.com/lsst-ts/ts_m2gui/]. Assume the host machine is using the CentOS, you can do the following to enter the container:

{code:bash}
docker run -it --rm -v ${path_to_ts_m2gui}:${path_of_package_in_container} ${docker_image}:${image_tag}
{code}

Note that you should not use the image forward to enter the container, which simulates the condition to run the CI on Jenkins instance. To setup this package (*ts_m2gui*), you can do *setup -kr ${path_of_package}* if the *eups* is used. Or you can export the *PYTHONPATH* directly for *ts_m2gui/python*.

After this, if you do *pytest tests/* under *ts_m2gui* directory, you should see all tests passed without prompting any window as the following:

{code:text}
[saluser@ba2452d2ef09 ts_m2gui]$ pytest tests/
============================= test session starts ==============================
platform linux -- Python 3.10.5, pytest-7.1.2, pluggy-1.0.0
PySide2 5.13.2 -- Qt runtime 5.12.9 -- Qt compiled 5.12.9
rootdir: /home/saluser/ts_m2gui, configfile: setup.cfg
plugins: cov-3.0.0, remotedata-0.3.3, astropy-header-0.1.2, openfiles-0.5.0, forked-1.4.0, session2file-0.1.11, hypothesis-6.47.1, mock-3.8.2, subtests-0.8.0, doctestplus-0.12.0, arraydiff-0.3, xdist-2.5.0, asdf-2.10.1, astropy-0.10.0, flake8-1.1.1, filter-subpackage-0.1.1, xvfb-2.0.0, qt-4.1.0, anyio-3.6.1, asyncio-0.18.3, black-0.3.12, tornasync-0.6.0.post2, mypy-0.8.0
asyncio: mode=legacy
collected 172 items

tests/test_control_tabs.py s..... [ 3%]
tests/test_fault_manager.py ............. [ 11%]
tests/test_main_window.py s.. [ 12%]
tests/test_model.py ....................... [ 26%]
tests/test_utility_monitor.py .................... [ 37%]
tests/test_utils.py ...... [ 41%]
tests/controltab/test_tab_actuator_control.py s........... [ 48%]
tests/controltab/test_tab_alarm_warn.py s....... [ 52%]
tests/controltab/test_tab_cell_status.py s.... [ 55%]
tests/controltab/test_tab_config_view.py s. [ 56%]
tests/controltab/test_tab_default.py s.. [ 58%]
tests/controltab/test_tab_detailed_force.py s.. [ 60%]
tests/controltab/test_tab_diagnostics.py s........ [ 65%]
tests/controltab/test_tab_overview.py s...... [ 69%]
tests/controltab/test_tab_rigid_body_pos.py s.... [ 72%]
tests/controltab/test_tab_settings.py s.. [ 74%]
tests/controltab/test_tab_utility_view.py s....... [ 79%]
tests/display/test_figure_constant_realtime.py s... [ 81%]
tests/display/test_figure_constant_static.py s......... [ 87%]
tests/display/test_gauge.py s.... [ 90%]
tests/display/test_view_mirror.py s.... [ 93%]
tests/layout/test_layout_control.py s... [ 95%]
tests/layout/test_layout_control_mode.py s... [ 97%]
tests/layout/test_layout_local_mode.py s... [100%]

=============================== warnings summary ===============================
../../../opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/pytest_asyncio/plugin.py:191
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/pytest_asyncio/plugin.py:191: DeprecationWarning: The 'asyncio_mode' default value will change to 'strict' in future, please explicitly use 'asyncio_mode=strict' or 'asyncio_mode=auto' in pytest configuration file.
    config.issue_config_time_warning(LEGACY_MODE, stacklevel=2)

tests/test_fault_manager.py::flake-8::FLAKE8
tests/test_fault_manager.py::flake-8::FLAKE8
tests/test_model.py::flake-8::FLAKE8
tests/test_model.py::flake-8::FLAKE8
tests/test_utility_monitor.py::flake-8::FLAKE8
tests/test_utility_monitor.py::flake-8::FLAKE8
tests/test_utils.py::flake-8::FLAKE8
tests/test_utils.py::flake-8::FLAKE8
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/flake8/plugins/manager.py:261: DeprecationWarning: SelectableGroups dict interface is deprecated. Use select.
    eps = importlib_metadata.entry_points().get(self.namespace, ())

../../../opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/cacheprovider.py:433
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/cacheprovider.py:433: PytestCacheWarning: cache could not write path /home/saluser/ts_m2gui/.pytest_cache/v/cache/nodeids
    config.cache.set("cache/nodeids", sorted(self.cached_nodeids))

../../../opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/stepwise.py:52
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/stepwise.py:52: PytestCacheWarning: cache could not write path /home/saluser/ts_m2gui/.pytest_cache/v/cache/stepwise
    session.config.cache.set(STEPWISE_CACHE_DIR, [])

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
================ 152 passed, 20 skipped, 11 warnings in 15.90s =================
/opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/pytest_flake8.py:84: PytestCacheWarning: cache could not write path /home/saluser/ts_m2gui/.pytest_cache/v/flake8/mtimes
  config.cache.set(HISTKEY, config._flake8mtimes)
{code}

Please help to install the packages (*xorg-x11-server-Xvfb* and *pytest-xvfb*) in the docker image of *lsstts/develop-env:develop*. By doing this, the unit tests with PySide2 can be executed without prompting the windows, which is important when using the Jenkins to do the CI job. The former can use the *dnf* to install and the latter can be installed by *conda -c conda-forge*.

The installation can be tested by [ts_m2gui|https://github.com/lsst-ts/ts_m2gui/]. Assume the host machine is using the CentOS, you can do the following to enter the container:

{code:bash}
docker run -it --rm -v ${path_to_ts_m2gui}:${path_of_package_in_container} ${docker_image}:${image_tag}
{code}

Note that you *SHOULD NOT* use the image forward to enter the container, which simulates the condition to run the CI on Jenkins instance. To setup this package (*ts_m2gui*), you can do *setup -kr ${path_of_package}* if the *eups* is used. Or you can export the *PYTHONPATH* directly for *ts_m2gui/python*.

After this, if you do *pytest tests/* under *ts_m2gui* directory, you should see all tests passed without prompting any window as the following:

{code:text}
[saluser@ba2452d2ef09 ts_m2gui]$ pytest tests/
============================= test session starts ==============================
platform linux -- Python 3.10.5, pytest-7.1.2, pluggy-1.0.0
PySide2 5.13.2 -- Qt runtime 5.12.9 -- Qt compiled 5.12.9
rootdir: /home/saluser/ts_m2gui, configfile: setup.cfg
plugins: cov-3.0.0, remotedata-0.3.3, astropy-header-0.1.2, openfiles-0.5.0, forked-1.4.0, session2file-0.1.11, hypothesis-6.47.1, mock-3.8.2, subtests-0.8.0, doctestplus-0.12.0, arraydiff-0.3, xdist-2.5.0, asdf-2.10.1, astropy-0.10.0, flake8-1.1.1, filter-subpackage-0.1.1, xvfb-2.0.0, qt-4.1.0, anyio-3.6.1, asyncio-0.18.3, black-0.3.12, tornasync-0.6.0.post2, mypy-0.8.0
asyncio: mode=legacy
collected 172 items

tests/test_control_tabs.py s..... [ 3%]
tests/test_fault_manager.py ............. [ 11%]
tests/test_main_window.py s.. [ 12%]
tests/test_model.py ....................... [ 26%]
tests/test_utility_monitor.py .................... [ 37%]
tests/test_utils.py ...... [ 41%]
tests/controltab/test_tab_actuator_control.py s........... [ 48%]
tests/controltab/test_tab_alarm_warn.py s....... [ 52%]
tests/controltab/test_tab_cell_status.py s.... [ 55%]
tests/controltab/test_tab_config_view.py s. [ 56%]
tests/controltab/test_tab_default.py s.. [ 58%]
tests/controltab/test_tab_detailed_force.py s.. [ 60%]
tests/controltab/test_tab_diagnostics.py s........ [ 65%]
tests/controltab/test_tab_overview.py s...... [ 69%]
tests/controltab/test_tab_rigid_body_pos.py s.... [ 72%]
tests/controltab/test_tab_settings.py s.. [ 74%]
tests/controltab/test_tab_utility_view.py s....... [ 79%]
tests/display/test_figure_constant_realtime.py s... [ 81%]
tests/display/test_figure_constant_static.py s......... [ 87%]
tests/display/test_gauge.py s.... [ 90%]
tests/display/test_view_mirror.py s.... [ 93%]
tests/layout/test_layout_control.py s... [ 95%]
tests/layout/test_layout_control_mode.py s... [ 97%]
tests/layout/test_layout_local_mode.py s... [100%]

=============================== warnings summary ===============================
../../../opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/pytest_asyncio/plugin.py:191
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/pytest_asyncio/plugin.py:191: DeprecationWarning: The 'asyncio_mode' default value will change to 'strict' in future, please explicitly use 'asyncio_mode=strict' or 'asyncio_mode=auto' in pytest configuration file.
    config.issue_config_time_warning(LEGACY_MODE, stacklevel=2)

tests/test_fault_manager.py::flake-8::FLAKE8
tests/test_fault_manager.py::flake-8::FLAKE8
tests/test_model.py::flake-8::FLAKE8
tests/test_model.py::flake-8::FLAKE8
tests/test_utility_monitor.py::flake-8::FLAKE8
tests/test_utility_monitor.py::flake-8::FLAKE8
tests/test_utils.py::flake-8::FLAKE8
tests/test_utils.py::flake-8::FLAKE8
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/flake8/plugins/manager.py:261: DeprecationWarning: SelectableGroups dict interface is deprecated. Use select.
    eps = importlib_metadata.entry_points().get(self.namespace, ())

../../../opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/cacheprovider.py:433
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/cacheprovider.py:433: PytestCacheWarning: cache could not write path /home/saluser/ts_m2gui/.pytest_cache/v/cache/nodeids
    config.cache.set("cache/nodeids", sorted(self.cached_nodeids))

../../../opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/stepwise.py:52
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/stepwise.py:52: PytestCacheWarning: cache could not write path /home/saluser/ts_m2gui/.pytest_cache/v/cache/stepwise
    session.config.cache.set(STEPWISE_CACHE_DIR, [])

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
================ 152 passed, 20 skipped, 11 warnings in 15.90s =================
/opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/pytest_flake8.py:84: PytestCacheWarning: cache could not write path /home/saluser/ts_m2gui/.pytest_cache/v/flake8/mtimes
  config.cache.set(HISTKEY, config._flake8mtimes)
{code}

Te-Wei Tsai made changes - 10/Aug/22 7:13 PM

Description

Please help to install the packages (*xorg-x11-server-Xvfb* and *pytest-xvfb*) in the docker image of *lsstts/develop-env:develop*. By doing this, the unit tests with PySide2 can be executed without prompting the windows, which is important when using the Jenkins to do the CI job. The former can use the *dnf* to install and the latter can be installed by *conda -c conda-forge*.

The installation can be tested by [ts_m2gui|https://github.com/lsst-ts/ts_m2gui/]. Assume the host machine is using the CentOS, you can do the following to enter the container:

{code:bash}
docker run -it --rm -v ${path_to_ts_m2gui}:${path_of_package_in_container} ${docker_image}:${image_tag}
{code}

Note that you *SHOULD NOT* use the image forward to enter the container, which simulates the condition to run the CI on Jenkins instance. To setup this package (*ts_m2gui*), you can do *setup -kr ${path_of_package}* if the *eups* is used. Or you can export the *PYTHONPATH* directly for *ts_m2gui/python*.

After this, if you do *pytest tests/* under *ts_m2gui* directory, you should see all tests passed without prompting any window as the following:

{code:text}
[saluser@ba2452d2ef09 ts_m2gui]$ pytest tests/
============================= test session starts ==============================
platform linux -- Python 3.10.5, pytest-7.1.2, pluggy-1.0.0
PySide2 5.13.2 -- Qt runtime 5.12.9 -- Qt compiled 5.12.9
rootdir: /home/saluser/ts_m2gui, configfile: setup.cfg
plugins: cov-3.0.0, remotedata-0.3.3, astropy-header-0.1.2, openfiles-0.5.0, forked-1.4.0, session2file-0.1.11, hypothesis-6.47.1, mock-3.8.2, subtests-0.8.0, doctestplus-0.12.0, arraydiff-0.3, xdist-2.5.0, asdf-2.10.1, astropy-0.10.0, flake8-1.1.1, filter-subpackage-0.1.1, xvfb-2.0.0, qt-4.1.0, anyio-3.6.1, asyncio-0.18.3, black-0.3.12, tornasync-0.6.0.post2, mypy-0.8.0
asyncio: mode=legacy
collected 172 items

tests/test_control_tabs.py s..... [ 3%]
tests/test_fault_manager.py ............. [ 11%]
tests/test_main_window.py s.. [ 12%]
tests/test_model.py ....................... [ 26%]
tests/test_utility_monitor.py .................... [ 37%]
tests/test_utils.py ...... [ 41%]
tests/controltab/test_tab_actuator_control.py s........... [ 48%]
tests/controltab/test_tab_alarm_warn.py s....... [ 52%]
tests/controltab/test_tab_cell_status.py s.... [ 55%]
tests/controltab/test_tab_config_view.py s. [ 56%]
tests/controltab/test_tab_default.py s.. [ 58%]
tests/controltab/test_tab_detailed_force.py s.. [ 60%]
tests/controltab/test_tab_diagnostics.py s........ [ 65%]
tests/controltab/test_tab_overview.py s...... [ 69%]
tests/controltab/test_tab_rigid_body_pos.py s.... [ 72%]
tests/controltab/test_tab_settings.py s.. [ 74%]
tests/controltab/test_tab_utility_view.py s....... [ 79%]
tests/display/test_figure_constant_realtime.py s... [ 81%]
tests/display/test_figure_constant_static.py s......... [ 87%]
tests/display/test_gauge.py s.... [ 90%]
tests/display/test_view_mirror.py s.... [ 93%]
tests/layout/test_layout_control.py s... [ 95%]
tests/layout/test_layout_control_mode.py s... [ 97%]
tests/layout/test_layout_local_mode.py s... [100%]

=============================== warnings summary ===============================
../../../opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/pytest_asyncio/plugin.py:191
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/pytest_asyncio/plugin.py:191: DeprecationWarning: The 'asyncio_mode' default value will change to 'strict' in future, please explicitly use 'asyncio_mode=strict' or 'asyncio_mode=auto' in pytest configuration file.
    config.issue_config_time_warning(LEGACY_MODE, stacklevel=2)

tests/test_fault_manager.py::flake-8::FLAKE8
tests/test_fault_manager.py::flake-8::FLAKE8
tests/test_model.py::flake-8::FLAKE8
tests/test_model.py::flake-8::FLAKE8
tests/test_utility_monitor.py::flake-8::FLAKE8
tests/test_utility_monitor.py::flake-8::FLAKE8
tests/test_utils.py::flake-8::FLAKE8
tests/test_utils.py::flake-8::FLAKE8
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/flake8/plugins/manager.py:261: DeprecationWarning: SelectableGroups dict interface is deprecated. Use select.
    eps = importlib_metadata.entry_points().get(self.namespace, ())

../../../opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/cacheprovider.py:433
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/cacheprovider.py:433: PytestCacheWarning: cache could not write path /home/saluser/ts_m2gui/.pytest_cache/v/cache/nodeids
    config.cache.set("cache/nodeids", sorted(self.cached_nodeids))

../../../opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/stepwise.py:52
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/stepwise.py:52: PytestCacheWarning: cache could not write path /home/saluser/ts_m2gui/.pytest_cache/v/cache/stepwise
    session.config.cache.set(STEPWISE_CACHE_DIR, [])

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
================ 152 passed, 20 skipped, 11 warnings in 15.90s =================
/opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/pytest_flake8.py:84: PytestCacheWarning: cache could not write path /home/saluser/ts_m2gui/.pytest_cache/v/flake8/mtimes
  config.cache.set(HISTKEY, config._flake8mtimes)
{code}

Please help to install the packages (*xorg-x11-server-Xvfb* and *pytest-xvfb*) in the docker image of *lsstts/develop-env:develop*. By doing this, the unit tests with PySide2 can be executed without prompting the windows, which is important when using the Jenkins to do the CI job. The former can use the *dnf* to install and the latter can be installed by *conda -c conda-forge*.

The installation can be tested by [ts_m2gui|https://github.com/lsst-ts/ts_m2gui/]. Assume the host machine is using the CentOS, you can do the following to enter the container:

{code:bash}
docker run -it --rm -v ${path_to_ts_m2gui}:${path_of_package_in_container} ${docker_image}:${image_tag}
{code}

Note that you *SHOULD NOT* use the image forward to enter the container, which simulates the condition to run the CI on Jenkins instance. To setup this package (*ts_m2gui*), you can do *setup -kr ${path_of_package}* if the *eups* is used. Or you can export the *PYTHONPATH* directly for *ts_m2gui/python*.

After this, if you do *pytest tests/* under *ts_m2gui* directory, you should see all tests pass without prompting any window as the following:

{code:text}
[saluser@ba2452d2ef09 ts_m2gui]$ pytest tests/
============================= test session starts ==============================
platform linux -- Python 3.10.5, pytest-7.1.2, pluggy-1.0.0
PySide2 5.13.2 -- Qt runtime 5.12.9 -- Qt compiled 5.12.9
rootdir: /home/saluser/ts_m2gui, configfile: setup.cfg
plugins: cov-3.0.0, remotedata-0.3.3, astropy-header-0.1.2, openfiles-0.5.0, forked-1.4.0, session2file-0.1.11, hypothesis-6.47.1, mock-3.8.2, subtests-0.8.0, doctestplus-0.12.0, arraydiff-0.3, xdist-2.5.0, asdf-2.10.1, astropy-0.10.0, flake8-1.1.1, filter-subpackage-0.1.1, xvfb-2.0.0, qt-4.1.0, anyio-3.6.1, asyncio-0.18.3, black-0.3.12, tornasync-0.6.0.post2, mypy-0.8.0
asyncio: mode=legacy
collected 172 items

tests/test_control_tabs.py s..... [ 3%]
tests/test_fault_manager.py ............. [ 11%]
tests/test_main_window.py s.. [ 12%]
tests/test_model.py ....................... [ 26%]
tests/test_utility_monitor.py .................... [ 37%]
tests/test_utils.py ...... [ 41%]
tests/controltab/test_tab_actuator_control.py s........... [ 48%]
tests/controltab/test_tab_alarm_warn.py s....... [ 52%]
tests/controltab/test_tab_cell_status.py s.... [ 55%]
tests/controltab/test_tab_config_view.py s. [ 56%]
tests/controltab/test_tab_default.py s.. [ 58%]
tests/controltab/test_tab_detailed_force.py s.. [ 60%]
tests/controltab/test_tab_diagnostics.py s........ [ 65%]
tests/controltab/test_tab_overview.py s...... [ 69%]
tests/controltab/test_tab_rigid_body_pos.py s.... [ 72%]
tests/controltab/test_tab_settings.py s.. [ 74%]
tests/controltab/test_tab_utility_view.py s....... [ 79%]
tests/display/test_figure_constant_realtime.py s... [ 81%]
tests/display/test_figure_constant_static.py s......... [ 87%]
tests/display/test_gauge.py s.... [ 90%]
tests/display/test_view_mirror.py s.... [ 93%]
tests/layout/test_layout_control.py s... [ 95%]
tests/layout/test_layout_control_mode.py s... [ 97%]
tests/layout/test_layout_local_mode.py s... [100%]

=============================== warnings summary ===============================
../../../opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/pytest_asyncio/plugin.py:191
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/pytest_asyncio/plugin.py:191: DeprecationWarning: The 'asyncio_mode' default value will change to 'strict' in future, please explicitly use 'asyncio_mode=strict' or 'asyncio_mode=auto' in pytest configuration file.
    config.issue_config_time_warning(LEGACY_MODE, stacklevel=2)

tests/test_fault_manager.py::flake-8::FLAKE8
tests/test_fault_manager.py::flake-8::FLAKE8
tests/test_model.py::flake-8::FLAKE8
tests/test_model.py::flake-8::FLAKE8
tests/test_utility_monitor.py::flake-8::FLAKE8
tests/test_utility_monitor.py::flake-8::FLAKE8
tests/test_utils.py::flake-8::FLAKE8
tests/test_utils.py::flake-8::FLAKE8
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/flake8/plugins/manager.py:261: DeprecationWarning: SelectableGroups dict interface is deprecated. Use select.
    eps = importlib_metadata.entry_points().get(self.namespace, ())

../../../opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/cacheprovider.py:433
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/cacheprovider.py:433: PytestCacheWarning: cache could not write path /home/saluser/ts_m2gui/.pytest_cache/v/cache/nodeids
    config.cache.set("cache/nodeids", sorted(self.cached_nodeids))

../../../opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/stepwise.py:52
  /opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/_pytest/stepwise.py:52: PytestCacheWarning: cache could not write path /home/saluser/ts_m2gui/.pytest_cache/v/cache/stepwise
    session.config.cache.set(STEPWISE_CACHE_DIR, [])

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
================ 152 passed, 20 skipped, 11 warnings in 15.90s =================
/opt/lsst/software/stack/conda/envs/lsst-scipipe-4.1.0/lib/python3.10/site-packages/pytest_flake8.py:84: PytestCacheWarning: cache could not write path /home/saluser/ts_m2gui/.pytest_cache/v/flake8/mtimes
  config.cache.set(HISTKEY, config._flake8mtimes)
{code}

Te-Wei Tsai made changes - 10/Aug/22 7:13 PM

Assignee

Te-Wei Tsai [ ttsai ]

Wouter van Reeven [ wvreeven ]

Wouter van Reeven made changes - 11/Aug/22 10:55 AM

Sprint

TSSW Sprint - Aug 15 - Aug 29 [ 1183 ]

Wouter van Reeven made changes - 16/Aug/22 4:19 PM

Status

To Do [ 10001 ]

In Progress [ 3 ]

Wouter van Reeven made changes - 17/Aug/22 8:55 AM

Story Points

1

Wouter van Reeven made changes - 17/Aug/22 12:43 PM

Link

This issue relates to ~~DM-35374~~ [ ~~DM-35374~~ ]

Wouter van Reeven made changes - 22/Aug/22 7:24 PM

Reviewers		Michael Reuter [ mareuter ]
Status	In Progress [ 3 ]	In Review [ 10004 ]

Michael Reuter made changes - 23/Aug/22 2:51 PM

Status

In Review [ 10004 ]

Reviewed [ 10101 ]

Wouter van Reeven made changes - 23/Aug/22 2:57 PM

Resolution		Done [ 10000 ]
Status	Reviewed [ 10101 ]	Done [ 10002 ]

Andy Clements made changes - 28/Aug/22 2:19 PM

Epic Link

DM-27720 [ 442125 ]

DM-27721 [ 442128 ]

Te-Wei Tsai made changes - 03/Jan/23 12:07 PM

Link

This issue relates to ~~DM-37453~~ [ ~~DM-37453~~ ]

Data Management

Install Packages for the Unit Tests with PySide2

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