Details
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Type:
Bug
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Status: Done
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Resolution: Done
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Fix Version/s: None
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Component/s: Developer Infrastructure, lsstsw
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Labels:None
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Story Points:0.667
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Epic Link:
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Team:SQuaRE
Description
Testing the fixes for the deploy script in DM-4359 it seems that the part of the script installing miniconda no longer works on OS X because the list of packages to be installed has been derived from a Linux system and not all the Linux packages have OS X equivalents. There needs to be a per-OS list of packages. The default OS X list seems to be:
# This file may be used to create an environment using:
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# $ conda create --name <env> --file <this file>
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# platform: osx-64
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astropy=1.1.1=np110py27_0
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conda=3.19.1=py27_0
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conda-env=2.4.5=py27_0
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cycler=0.9.0=py27_0
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cython=0.23.4=py27_1
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freetype=2.5.5=0
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libpng=1.6.17=0
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matplotlib=1.5.1=np110py27_0
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nomkl=1.0=0
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numpy=1.10.4=py27_nomkl_0
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openssl=1.0.2f=0
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pandas=0.17.1=np110py27_0
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pip=8.0.2=py27_0
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pycosat=0.6.1=py27_0
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pycrypto=2.6.1=py27_0
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pyparsing=2.0.3=py27_0
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pyqt=4.11.4=py27_1
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python=2.7.11=0
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python-dateutil=2.4.2=py27_0
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pytz=2015.7=py27_0
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pyyaml=3.11=py27_1
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qt=4.8.7=1
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readline=6.2=2
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requests=2.9.1=py27_0
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scipy=0.17.0=np110py27_nomkl_0
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setuptools=19.6.2=py27_0
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sip=4.16.9=py27_0
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six=1.10.0=py27_0
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sqlalchemy=1.0.11=py27_0
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sqlite=3.9.2=0
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tk=8.5.18=0
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wheel=0.29.0=py27_0
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yaml=0.1.6=0
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zlib=1.2.8=0
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Attachments
Issue Links
- blocks
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- Done
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- Done
- is duplicated by
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- Invalid
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- Invalid
- is triggered by
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- Done
- relates to
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DM-4345 OSX CI/jenkins build slaves
- Done
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- Done
Activity
That list is on this ticket as well as on DM-5157
Err, I thought that was the linux list for some reason... thank you.
Is there any timeline for resolution of this. I have a new student who after updating her OSX is stuck at instalation of miniconda. Or is there are quick workaround?
Thx.
Darko Jevremovic
added a comment - Is there any timeline for resolution of this. I have a new student who after updating her OSX is stuck at instalation of miniconda. Or is there are quick workaround?
Thx. Use bin/deploy -b for now.
My intent is for this to be resolved this week.
After quite a bit of fiddling, I seem to have gotten OSX working under travis. This required setting up the travis matrix with multiple languages, which the docs say is unsupported and the linter warns on, but this seems to be the only to be able to use the pre-canned python versions on linux combined with a vanilla env on osx (travis does not support python on OSX). The OSX build seems to fail intermittently running rebuild due to the 10 minute travis console output timeout. I have marked the OSX builds as allowed to fail due to the random timeouts and the long wait for OSX workers to start.
Merged without review as the change is trivial (and was blocking DM-5179).
My inclination is to fix this correctly and have a separate linux/osx conda package lists. Could someone provide a package list from OSX after doing a -b install?